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Enhancement in statistical and image analysis for in situ mu SXRF studies of elemental distribution and co-localization, using Dioscorea balcanica

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2013
693.pdf (954.5Kb)
Authors
Ducic, Tanja
Borchert, Manuela
Savić, Aleksandar G
Kalauzi, Aleksandar
Mitrović, Aleksandra
Radotić, Ksenija
Article (Published version)
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Abstract
Synchrotron-based X-ray microfluorescence (mu SXRF) is an analytical method suitable for in situ investigation of the distribution of micronutrient and macronutrient elements in several-micrometres-thick unstained biological samples, e. g. single cells and tissues. Elements are mapped and quantified at sub-p. p. m. concentrations. In this study the quantity, distribution and grouping/co-localization of various elements have been identified in straight and twisted internodes of the stems of the monocotyledonous climber D. balcanica Kosanin. Three different statistical methods were employed to analyse the macronutrient and micronutrient distributions and co-localization. Macronutrient elements (K, P, Ca, Cl) are distributed homogeneously in both straight and twisted internodes. Micronutrient elements are mostly grouped in the vasculature and in the sclerenchyma cell layer. In addition, co-localization of micronutrient elements is much more prominent in twisted than in straight internodes.... These image analyses and statistical methods provided very similar outcomes and could be applied to various types of biological samples imaged by mSXRF.

Keywords:
X-ray fluorescence microscopy / statistical analysis / image analysis / Dioscorea balcanica Kosanin
Source:
Journal of Synchrotron Radiation, 2013, 20, 339-346
Publisher:
  • Wiley-Blackwell, Hoboken
Funding / projects:
  • Study of structure-function relationships in the plant cell wall and modifications of the wall structure by enzyme engineering (RS-173017)
  • II-20080239]

DOI: 10.1107/S0909049512050170

ISSN: 0909-0495

PubMed: 23412492

WoS: 000314929700018

Scopus: 2-s2.0-84874088216
[ Google Scholar ]
3
3
URI
http://rimsi.imsi.bg.ac.rs/handle/123456789/696
Collections
  • Radovi istraživača / Researchers’ publications
Institution/Community
Institut za multidisciplinarna istraživanja
TY  - JOUR
AU  - Ducic, Tanja
AU  - Borchert, Manuela
AU  - Savić, Aleksandar G
AU  - Kalauzi, Aleksandar
AU  - Mitrović, Aleksandra
AU  - Radotić, Ksenija
PY  - 2013
UR  - http://rimsi.imsi.bg.ac.rs/handle/123456789/696
AB  - Synchrotron-based X-ray microfluorescence (mu SXRF) is an analytical method suitable for in situ investigation of the distribution of micronutrient and macronutrient elements in several-micrometres-thick unstained biological samples, e. g. single cells and tissues. Elements are mapped and quantified at sub-p. p. m. concentrations. In this study the quantity, distribution and grouping/co-localization of various elements have been identified in straight and twisted internodes of the stems of the monocotyledonous climber D. balcanica Kosanin. Three different statistical methods were employed to analyse the macronutrient and micronutrient distributions and co-localization. Macronutrient elements (K, P, Ca, Cl) are distributed homogeneously in both straight and twisted internodes. Micronutrient elements are mostly grouped in the vasculature and in the sclerenchyma cell layer. In addition, co-localization of micronutrient elements is much more prominent in twisted than in straight internodes. These image analyses and statistical methods provided very similar outcomes and could be applied to various types of biological samples imaged by mSXRF.
PB  - Wiley-Blackwell, Hoboken
T2  - Journal of Synchrotron Radiation
T1  - Enhancement in statistical and image analysis for in situ mu SXRF studies of elemental distribution and co-localization, using Dioscorea balcanica
EP  - 346
SP  - 339
VL  - 20
DO  - 10.1107/S0909049512050170
ER  - 
@article{
author = "Ducic, Tanja and Borchert, Manuela and Savić, Aleksandar G and Kalauzi, Aleksandar and Mitrović, Aleksandra and Radotić, Ksenija",
year = "2013",
abstract = "Synchrotron-based X-ray microfluorescence (mu SXRF) is an analytical method suitable for in situ investigation of the distribution of micronutrient and macronutrient elements in several-micrometres-thick unstained biological samples, e. g. single cells and tissues. Elements are mapped and quantified at sub-p. p. m. concentrations. In this study the quantity, distribution and grouping/co-localization of various elements have been identified in straight and twisted internodes of the stems of the monocotyledonous climber D. balcanica Kosanin. Three different statistical methods were employed to analyse the macronutrient and micronutrient distributions and co-localization. Macronutrient elements (K, P, Ca, Cl) are distributed homogeneously in both straight and twisted internodes. Micronutrient elements are mostly grouped in the vasculature and in the sclerenchyma cell layer. In addition, co-localization of micronutrient elements is much more prominent in twisted than in straight internodes. These image analyses and statistical methods provided very similar outcomes and could be applied to various types of biological samples imaged by mSXRF.",
publisher = "Wiley-Blackwell, Hoboken",
journal = "Journal of Synchrotron Radiation",
title = "Enhancement in statistical and image analysis for in situ mu SXRF studies of elemental distribution and co-localization, using Dioscorea balcanica",
pages = "346-339",
volume = "20",
doi = "10.1107/S0909049512050170"
}
Ducic, T., Borchert, M., Savić, A. G., Kalauzi, A., Mitrović, A.,& Radotić, K.. (2013). Enhancement in statistical and image analysis for in situ mu SXRF studies of elemental distribution and co-localization, using Dioscorea balcanica. in Journal of Synchrotron Radiation
Wiley-Blackwell, Hoboken., 20, 339-346.
https://doi.org/10.1107/S0909049512050170
Ducic T, Borchert M, Savić AG, Kalauzi A, Mitrović A, Radotić K. Enhancement in statistical and image analysis for in situ mu SXRF studies of elemental distribution and co-localization, using Dioscorea balcanica. in Journal of Synchrotron Radiation. 2013;20:339-346.
doi:10.1107/S0909049512050170 .
Ducic, Tanja, Borchert, Manuela, Savić, Aleksandar G, Kalauzi, Aleksandar, Mitrović, Aleksandra, Radotić, Ksenija, "Enhancement in statistical and image analysis for in situ mu SXRF studies of elemental distribution and co-localization, using Dioscorea balcanica" in Journal of Synchrotron Radiation, 20 (2013):339-346,
https://doi.org/10.1107/S0909049512050170 . .

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