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Genetic polymorphism of lactic acid bacteria isolated from "Pirot 'ironed' sausage" from Serbia

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2019
1244.pdf (447.6Kb)
Authors
Bogdanović, Svetlana
Jelušić, Aleksandra
Berić, Tanja
Nikolić, Ivan
Danilović, Bojana
Stanković, Slaviša
Dimkić, Ivica
Article (Published version)
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Abstract
The "Pirot 'ironed' sausage" (Pis) is a traditional, dry, fermented product originating from the town of Pirot, situated in southeastern Serbia. This product is made from different types of meat (goat, sheep, beef and donkey) and spices, without additives or starter cultures. Pis is an organic, unprocessed product, without heat or smoke treatment. The aim of this study was to characterize 120 isolates of lactic acid bacteria (LAB) from Pis produced by six different brands during a two-year period using phenotypic and genetic identification. Preliminary characterization of the LAB was based on general morphology and biochemical tests. Repetitive elements such as REP, BOX and GTG(5), found in the genome of these bacteria, and randomly amplified polymorphic DNA-polymerase chain reaction (RAPD PCR) sequences were used for determination of genetic polymorphism. Identification by 16S rRNA gene sequencing showed the presence of only two LAB species, Lactobacillus sakei (76%) and Leuconostoc m...esenteroides (24%). However, genetic polymorphism was detected using fingerprinting methods. In comparison with other primers, the profiles obtained with GTG(5) showed the highest heterogeneity for most of the tested isolates, with sequencing results additionally confirming its discriminatory power. In addition, M13 RAPD primer also produced satisfactory separation of the tested isolates.

Keywords:
Pirot 'ironed' sausage / Leuconostoc mesenteroides / Lactobacillus sakei / GTG(5) PCR
Source:
Archives of Biological Sciences, 2019, 71, 1, 95-102
Publisher:
  • Srpsko biološko društvo, Beograd, i dr.
Funding / projects:
  • Molecular characterization of bacteria from genera Bacillus and Pseudomonas as potential agents for biological control (RS-173026)

DOI: 10.2298/ABS180920051B

ISSN: 0354-4664

WoS: 000463592100011

Scopus: 2-s2.0-85065491605
[ Google Scholar ]
1
URI
http://rimsi.imsi.bg.ac.rs/handle/123456789/1247
Collections
  • Radovi istraživača / Researchers’ publications
Institution/Community
Institut za multidisciplinarna istraživanja
TY  - JOUR
AU  - Bogdanović, Svetlana
AU  - Jelušić, Aleksandra
AU  - Berić, Tanja
AU  - Nikolić, Ivan
AU  - Danilović, Bojana
AU  - Stanković, Slaviša
AU  - Dimkić, Ivica
PY  - 2019
UR  - http://rimsi.imsi.bg.ac.rs/handle/123456789/1247
AB  - The "Pirot 'ironed' sausage" (Pis) is a traditional, dry, fermented product originating from the town of Pirot, situated in southeastern Serbia. This product is made from different types of meat (goat, sheep, beef and donkey) and spices, without additives or starter cultures. Pis is an organic, unprocessed product, without heat or smoke treatment. The aim of this study was to characterize 120 isolates of lactic acid bacteria (LAB) from Pis produced by six different brands during a two-year period using phenotypic and genetic identification. Preliminary characterization of the LAB was based on general morphology and biochemical tests. Repetitive elements such as REP, BOX and GTG(5), found in the genome of these bacteria, and randomly amplified polymorphic DNA-polymerase chain reaction (RAPD PCR) sequences were used for determination of genetic polymorphism. Identification by 16S rRNA gene sequencing showed the presence of only two LAB species, Lactobacillus sakei (76%) and Leuconostoc mesenteroides (24%). However, genetic polymorphism was detected using fingerprinting methods. In comparison with other primers, the profiles obtained with GTG(5) showed the highest heterogeneity for most of the tested isolates, with sequencing results additionally confirming its discriminatory power. In addition, M13 RAPD primer also produced satisfactory separation of the tested isolates.
PB  - Srpsko biološko društvo, Beograd, i dr.
T2  - Archives of Biological Sciences
T1  - Genetic polymorphism of lactic acid bacteria isolated from "Pirot 'ironed' sausage" from Serbia
EP  - 102
IS  - 1
SP  - 95
VL  - 71
DO  - 10.2298/ABS180920051B
ER  - 
@article{
author = "Bogdanović, Svetlana and Jelušić, Aleksandra and Berić, Tanja and Nikolić, Ivan and Danilović, Bojana and Stanković, Slaviša and Dimkić, Ivica",
year = "2019",
abstract = "The "Pirot 'ironed' sausage" (Pis) is a traditional, dry, fermented product originating from the town of Pirot, situated in southeastern Serbia. This product is made from different types of meat (goat, sheep, beef and donkey) and spices, without additives or starter cultures. Pis is an organic, unprocessed product, without heat or smoke treatment. The aim of this study was to characterize 120 isolates of lactic acid bacteria (LAB) from Pis produced by six different brands during a two-year period using phenotypic and genetic identification. Preliminary characterization of the LAB was based on general morphology and biochemical tests. Repetitive elements such as REP, BOX and GTG(5), found in the genome of these bacteria, and randomly amplified polymorphic DNA-polymerase chain reaction (RAPD PCR) sequences were used for determination of genetic polymorphism. Identification by 16S rRNA gene sequencing showed the presence of only two LAB species, Lactobacillus sakei (76%) and Leuconostoc mesenteroides (24%). However, genetic polymorphism was detected using fingerprinting methods. In comparison with other primers, the profiles obtained with GTG(5) showed the highest heterogeneity for most of the tested isolates, with sequencing results additionally confirming its discriminatory power. In addition, M13 RAPD primer also produced satisfactory separation of the tested isolates.",
publisher = "Srpsko biološko društvo, Beograd, i dr.",
journal = "Archives of Biological Sciences",
title = "Genetic polymorphism of lactic acid bacteria isolated from "Pirot 'ironed' sausage" from Serbia",
pages = "102-95",
number = "1",
volume = "71",
doi = "10.2298/ABS180920051B"
}
Bogdanović, S., Jelušić, A., Berić, T., Nikolić, I., Danilović, B., Stanković, S.,& Dimkić, I.. (2019). Genetic polymorphism of lactic acid bacteria isolated from "Pirot 'ironed' sausage" from Serbia. in Archives of Biological Sciences
Srpsko biološko društvo, Beograd, i dr.., 71(1), 95-102.
https://doi.org/10.2298/ABS180920051B
Bogdanović S, Jelušić A, Berić T, Nikolić I, Danilović B, Stanković S, Dimkić I. Genetic polymorphism of lactic acid bacteria isolated from "Pirot 'ironed' sausage" from Serbia. in Archives of Biological Sciences. 2019;71(1):95-102.
doi:10.2298/ABS180920051B .
Bogdanović, Svetlana, Jelušić, Aleksandra, Berić, Tanja, Nikolić, Ivan, Danilović, Bojana, Stanković, Slaviša, Dimkić, Ivica, "Genetic polymorphism of lactic acid bacteria isolated from "Pirot 'ironed' sausage" from Serbia" in Archives of Biological Sciences, 71, no. 1 (2019):95-102,
https://doi.org/10.2298/ABS180920051B . .

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