EUdaphobase - building bridges between cohabiting soil communities, environments, and methodologies
Аутори
Marjanovic, ZaklinaSchmalenberger, Achim
Frey, Beat
Oehl, Fritz
Baldrian, Petr
Cocimaru, Serghei
Krogh, Paul Henning
Chen, T.W.
Fiera, Cristina
Lesch, Stephan
Russell, David
Конференцијски прилог (Објављена верзија)
Метаподаци
Приказ свих података о документуАпстракт
Aim: Edaphobase is a database previously constructed by the Senckenberg Natural Museum in Görlitz in Germany for the purpose of connecting soil invertebrate taxa to their environment. To extend Edaphobase into a warehouse for data on soil biodiversity at the European level and improve its usefulness, COST Action “EUdaphobase” was launched. Action gathers a network of European specialists working on enlarging existing capacities, and improving the technical capabilities, to provide a unique database that would be used by the different levels of stakeholders (from farmers, research and education institutions to decision makers). Taxonomists, ecologists, modelers of soil ecosystem processes, financial and IT specialists joined to form a holistic picture of soil biodiversity and introduce it into the decision-making process in Europe.
Method: WG 7 of EUdaphobase is focused on two goals - to enable a framework for integrating the data on fungi, bacteria and microeukaryotes, and collating t...he data derived by molecular methods (metabarcoding, NGS-based, environmental DNA/RNA), on all soil organism groups.
Results: The highly demanding technical problems of incorporating fungal and molecular data into the already existing framework of Edaphobase were resolved. The joint work of researchers working on different soil organisms and techniques resulted in the unique possibility for a variety of users to provide/analyze/use data that include cohabiting taxa, their environments, and mutual relationships.
Conclusions: The outcome will enable the usage of the upgraded Edaphobase for holistic soil state evaluation and monitoring, as well as monitoring of the dynamics of soil communities/environments involved in different ecosystem services on the European level.
Кључне речи:
edaphobase, soil biodiversity, soil metadata, microbial dataИзвор:
Third Global Soil Biodiversity Conference, Dublin, Ireland, 13-15 March 2023. Abstract Book, 2023Финансирање / пројекти:
- CA18237 - European Soil-Biology Data Warehouse for Soil Protection (EUdaphobase)
Напомена:
- Abstract book was not published in hard copy and can be viewed on the congress site only https://gsb2023.org/
Институција/група
Institut za multidisciplinarna istraživanjaTY - CONF AU - Marjanovic, Zaklina AU - Schmalenberger, Achim AU - Frey, Beat AU - Oehl, Fritz AU - Baldrian, Petr AU - Cocimaru, Serghei AU - Krogh, Paul Henning AU - Chen, T.W. AU - Fiera, Cristina AU - Lesch, Stephan AU - Russell, David PY - 2023 UR - http://rimsi.imsi.bg.ac.rs/handle/123456789/3005 AB - Aim: Edaphobase is a database previously constructed by the Senckenberg Natural Museum in Görlitz in Germany for the purpose of connecting soil invertebrate taxa to their environment. To extend Edaphobase into a warehouse for data on soil biodiversity at the European level and improve its usefulness, COST Action “EUdaphobase” was launched. Action gathers a network of European specialists working on enlarging existing capacities, and improving the technical capabilities, to provide a unique database that would be used by the different levels of stakeholders (from farmers, research and education institutions to decision makers). Taxonomists, ecologists, modelers of soil ecosystem processes, financial and IT specialists joined to form a holistic picture of soil biodiversity and introduce it into the decision-making process in Europe. Method: WG 7 of EUdaphobase is focused on two goals - to enable a framework for integrating the data on fungi, bacteria and microeukaryotes, and collating the data derived by molecular methods (metabarcoding, NGS-based, environmental DNA/RNA), on all soil organism groups. Results: The highly demanding technical problems of incorporating fungal and molecular data into the already existing framework of Edaphobase were resolved. The joint work of researchers working on different soil organisms and techniques resulted in the unique possibility for a variety of users to provide/analyze/use data that include cohabiting taxa, their environments, and mutual relationships. Conclusions: The outcome will enable the usage of the upgraded Edaphobase for holistic soil state evaluation and monitoring, as well as monitoring of the dynamics of soil communities/environments involved in different ecosystem services on the European level. C3 - Third Global Soil Biodiversity Conference, Dublin, Ireland, 13-15 March 2023. Abstract Book T1 - EUdaphobase - building bridges between cohabiting soil communities, environments, and methodologies UR - https://hdl.handle.net/21.15107/rcub_rimsi_3005 ER -
@conference{ author = "Marjanovic, Zaklina and Schmalenberger, Achim and Frey, Beat and Oehl, Fritz and Baldrian, Petr and Cocimaru, Serghei and Krogh, Paul Henning and Chen, T.W. and Fiera, Cristina and Lesch, Stephan and Russell, David", year = "2023", abstract = "Aim: Edaphobase is a database previously constructed by the Senckenberg Natural Museum in Görlitz in Germany for the purpose of connecting soil invertebrate taxa to their environment. To extend Edaphobase into a warehouse for data on soil biodiversity at the European level and improve its usefulness, COST Action “EUdaphobase” was launched. Action gathers a network of European specialists working on enlarging existing capacities, and improving the technical capabilities, to provide a unique database that would be used by the different levels of stakeholders (from farmers, research and education institutions to decision makers). Taxonomists, ecologists, modelers of soil ecosystem processes, financial and IT specialists joined to form a holistic picture of soil biodiversity and introduce it into the decision-making process in Europe. Method: WG 7 of EUdaphobase is focused on two goals - to enable a framework for integrating the data on fungi, bacteria and microeukaryotes, and collating the data derived by molecular methods (metabarcoding, NGS-based, environmental DNA/RNA), on all soil organism groups. Results: The highly demanding technical problems of incorporating fungal and molecular data into the already existing framework of Edaphobase were resolved. The joint work of researchers working on different soil organisms and techniques resulted in the unique possibility for a variety of users to provide/analyze/use data that include cohabiting taxa, their environments, and mutual relationships. Conclusions: The outcome will enable the usage of the upgraded Edaphobase for holistic soil state evaluation and monitoring, as well as monitoring of the dynamics of soil communities/environments involved in different ecosystem services on the European level.", journal = "Third Global Soil Biodiversity Conference, Dublin, Ireland, 13-15 March 2023. Abstract Book", title = "EUdaphobase - building bridges between cohabiting soil communities, environments, and methodologies", url = "https://hdl.handle.net/21.15107/rcub_rimsi_3005" }
Marjanovic, Z., Schmalenberger, A., Frey, B., Oehl, F., Baldrian, P., Cocimaru, S., Krogh, P. H., Chen, T.W., Fiera, C., Lesch, S.,& Russell, D.. (2023). EUdaphobase - building bridges between cohabiting soil communities, environments, and methodologies. in Third Global Soil Biodiversity Conference, Dublin, Ireland, 13-15 March 2023. Abstract Book. https://hdl.handle.net/21.15107/rcub_rimsi_3005
Marjanovic Z, Schmalenberger A, Frey B, Oehl F, Baldrian P, Cocimaru S, Krogh PH, Chen T, Fiera C, Lesch S, Russell D. EUdaphobase - building bridges between cohabiting soil communities, environments, and methodologies. in Third Global Soil Biodiversity Conference, Dublin, Ireland, 13-15 March 2023. Abstract Book. 2023;. https://hdl.handle.net/21.15107/rcub_rimsi_3005 .
Marjanovic, Zaklina, Schmalenberger, Achim, Frey, Beat, Oehl, Fritz, Baldrian, Petr, Cocimaru, Serghei, Krogh, Paul Henning, Chen, T.W., Fiera, Cristina, Lesch, Stephan, Russell, David, "EUdaphobase - building bridges between cohabiting soil communities, environments, and methodologies" in Third Global Soil Biodiversity Conference, Dublin, Ireland, 13-15 March 2023. Abstract Book (2023), https://hdl.handle.net/21.15107/rcub_rimsi_3005 .